Abstract: In view of strengths, weaknesses, opportunities and threats problem that the modern agriculture scientific innovation faces in China, this article puts forward the development countermeasures of modern agriculture innovation on science and technology. The countermeasures include national policy support, improving the innovation system, strengthening funding, improving the quality of workers,perfecting the market mechanism and sustainable development, which makes agricultural innovation on science and technology in China to step onto the health sustainable development path, and has certain guiding sense to the modern innovation and development on science and technology.