菠萝AcRCI2A基因克隆及其在抗黑心病处理中的表达分析

    Cloning of AcRCI2A Gene from Pineapple and Its Expression Analysis in Blackheart Disease Resistance Treatment

    • 摘要:
      目的 克隆菠萝稀有冷诱导2基因(AcRCI2A)并探究其在菠萝抗黑心病处理中的表达情况,为通过该基因遗传改良菠萝果实黑心病抗性奠定基础。
      方法 以‘巴厘’菠萝果肉为材料,克隆AcRCI2A基因并进行生物信息学分析。利用同源重组方法将AcRCI2基因构建到C端融合GFP的pCAMBIA1300-35S载体上,并进行亚细胞定位分析。采用半定量RT-PCR检测AcRCI2A基因在2022年不同月份采收‘巴厘’菠萝果实中的表达情况。进一步采用qRT-PCR分析AcRCI2A基因在热空气、脱落酸(ABA)、低温处理以及对照菠萝果实贮藏过程中的表达模式,初步明确其响应非生物胁迫情况及与菠萝黑心病发生的关系。
      结果 成功克隆AcRCI2A基因,其编码区全长165 bp,编码54个氨基酸,在菠萝基因组网站未查到该序列,在NCBI网站上比对序列号为XM_020253166.1;生物信息学分析表明,AcRCI2A具有RCI2蛋白家族典型的保守结构域PMP3,包含2个跨膜结构域,无信号肽;进化树分析结果表明,AcRCI2A属于Group Ⅰ家族,与拟南芥AtRCI2C、AtRCI2H亲缘关系较近,可能在维持Na+/K+离子稳态和膜电位平衡中发挥重要作用;亚细胞定位分析显示AcRCI2A定位于质膜。菠萝果实黑心病发病率与采收时AcRCI2A的表达水平密切相关,采后易发生黑心病的菠萝果实中AcRCI2A表达量极低。进一步分析热空气、ABA和低温处理后菠萝果实黑心病发病率和AcRCI2A基因的表达情况,发现3种处理均显著降低菠萝采后黑心病发病率,其中热空气处理的抑制效果最佳,贮藏3、6、9 d时黑心病发病率仅为0%、0%、1%;AcRCI2A基因表达受热空气和ABA处理诱导,但受低温抑制,其高表达对应着菠萝果实采后成熟衰老过程中较低的黑心病发病率和发病指数。
      结论 AcRCI2A是典型的稀有冷诱导2蛋白,定位于质膜,其表达受热空气和ABA处理诱导和低温的抑制,与菠萝黑心病的抗性密切相关。

       

      Abstract:
      Objective To clone the rare cold-induced 2 gene (AcRCI2A) in pineapple and explore its expression in pineapple resistance to blackheart disease, laying the foundation for genetic improvement of blackheart disease resistance of pineapple fruit by this gene.
      Method The AcRCI2A gene was cloned from the pulp of 'Comte de Paris' pineapple and analyzed by bioinformatics. Then it was constructed into the pCAMBIA1300-35S vector with GFP fused at the C-terminus using homologous recombination, and its subcellular localization was analyzed. Semi-quantitative RT-PCR was used to detect the expression of AcRCI2A in 'Comte de Paris' pineapple fruits harvested in different months in 2022. Furthermore, qRT-PCR was employed to analyze the expression pattern of the AcRCI2A gene during the storage in pineapples treated with hot air, abscisic acid (ABA), low temperature, and control, to preliminarily clarify its response to abiotic stress and its relationship with the occurrence of pineapple blackheart disease.
      Result The AcRCI2A gene was successfully cloned, and its coding region was 165 bp in length, encoding 54 amino acids. This sequence was not found on the pineapple genome website, and the sequence number was XM_020253166.1 on the NCBI website. Bioinformatics analysis indicated that AcRCI2A possesses a typical conserved domain PMP3 of the RCI2 protein, contains two transmembrane domains and lacks a signal peptide. Phylogenetic tree analysis showed that AcRCI2A belongs to Group Ⅰ family and was closely related to AtRCI2C and AtRCI2H, potentially playing an important role in maintaining Na+/K+ homeostasis and membrane potential balance. Subcellular localization analysis revealed that AcRCI2A was localized to the plasma membrane. The occurrence of blackheart is closely related to the expression level of AcRCI2A at harvest and the expression level of AcRCI2A pineapple fruits prone to blackheart after harvest is extremely low. Further Analysis of the incidence of blackheart disease and the expression of AcRCI2A gene in pineapple fruit after hot air, ABA, and low temperature treatment showd that all three treatments significantly reduced the incidence of blackheart disease in postharvest pineapple fruit. The hot air treatment had the best inhibitory effect, and the incidence of blackheart disease was only 0%, 0% and 1% at 3, 6 and 9 days of storage. The expression of AcRCI2A gene was induced by hot air and ABA treatment, but inhibited by low temperature. The high expression of AcRCI2A corresponded to the lower incidence and occurrence index of blackheart disease during postharvest ripening and senescence of pineapple fruit.
      Conclusion AcRCI2A is a typical rare cold-induced 2 protein localized in the plasma membrane. Its expression is induced by hot air and ABA treatment but inhibited by low temperature, closely related to pineapple blackheart disease.