豆伞滑刃线虫扩展蛋白基因BdEXP1克隆与分析

    Cloning and Analysis of the Expansin Gene BdEXP1 from Migration Plant parasitic Nematode (Bursaphelenchus doui)

    • 摘要:
      目的 克隆豆伞滑刃线虫扩展蛋白(Expansin,EXP)基因BdEXP1并进行表达特性分析,为深入研究BdEXP1基因在豆伞滑刃线虫与寄主互作过程中的作用提供参考。
      方法 基于前期豆伞滑刃线虫体前端特异表达cDNA文库的筛选和测序结果,通过RACE技术克隆目的基因cDNA全长序列,并进行生物信息学分析;利用Southern杂交技术确定基因拷贝数,利用实时荧光定量PCR和原位杂交技术分别进行基因表达模式和表达定位分析。
      结果 克隆获得BdEXP1基因cDNA全长序列,GenBank登录号为PQ276072。该基因cDNA编码区长450 bp,编码149个氨基酸;DNA编码区长499 bp,包含2个外显子和1个内含子,为多拷贝基因。BdEXP1蛋白质相对分子量为16.16 kD,理论等电点为7.47,与松材线虫相似度最高、达64%,含有1个典型且保守的DPBB_SPI-like结构域,存在信号肽但无跨膜结构域,属于分泌型蛋白。实时荧光定量PCR分析表明,BdEXP1在豆伞滑刃线虫各个龄期表达无明显差异。原位杂交分析表明,BdEXP1基因在豆伞滑刃线虫食道腺特异表达。
      结论 成功克隆豆伞滑刃线虫BdEXP1基因,并证明该基因在线虫食道腺特异表达,推测其编码蛋白在线虫与寄主互作过程中分泌到体外发挥作用。

       

      Abstract:
      Objective An expansin gene BdEXP1 was cloned from Bursaphelenchus doui, and its expression characteristics were investigated in order to provide reference for the in-depth study of the function of BdEXP1 gene in the interactions between B. doui and hosts.
      Method Based on the previous screening and sequencing data of specific cDNA library of the anterior end of B. doui, the full-length cDNA sequence of EXP homologue was cloned by using RACE technology and further analyzed by bioinformatics. The gene copy number was identified by Southern blot. Further, the BdEXP1 expression pattern was investigated by real-time fluorescent quantitative PCR and the expression location was detected by in situ hybridization.
      Result The full-length cDNA of BdEXP1 gene was cloned (GenBank accession number: PQ276072). The cDNA coding region was 450 bp encoding 149 amino acids. The DNA coding region was 499 bp containing two exons and one intron. BdEXP1 was a member of a multicopy gene family identified by Southern blot. The BdEXP1 protein had an average molecular mass of 16.16 kD and a theoretical isoelectric point of 7.47. The BdEXP1 protein had the highest sequence similarity (64%) with the homologous protein of B. xylophilus, and contained a typical DPBB_SPI-like conservative domain and a signal peptide but no transmembrane structure, indicating that it was a secretory protein. The result of real-time fluorescent quantitative PCR showed that there were no significant differences in the expression levels of BdEXP1gene in all stages, and in situ hybridization analysis showed that the transcripts of BdEXP1 accumulated exclusively within the esophageal gland of B. doui.
      Conclusion The BdEXP1 gene was successfully cloned, and was also found to be expressed within the nematode esophageal gland of B. doui. Therefore, it was speculated that the BdEXP1 protein was excreted out of the body to play a role in interactions between nematode and host.

       

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